SIB



Glycoforest

Glycoforest is a partial de-novo algorithm for sequencing glycan structures based on MS/MS spectra.

Demo application

A demo web application is available at http://glycoforestwebapp-20181226143544--hostingbucket-dev.s3-website-us-east-1.amazonaws.com.
It can be accessed in two steps:
  1. Create an account
  2. Upload your data in mzxml format
Alternatively you can download a test dataset at https://glycoforestwebapp-20181226143544--hostingbucket-dev.s3.amazonaws.com/demo-data/glycoforest_test_data.zip

Source code

The Glycoforest tool source code is available on bitbucket.


License

Glycoforest is licensed under GNU Affero General Public License (AGPL 3).


Publications

If you use Glycoforest, please cite this reference:

Glycoforest 1.0.
Horlacher O, Jin C, Alocci D, Mariethoz J, Müller M, Karlsson NG, Lisacek F.
Analytical Chemistry. 2017. doi: 10.1021/acs.analchem.7b02754. PubMed PMID: 28901741

Contact

If you require more information please use this contact form.